BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB015C09SP1|AL426823
(943 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1700 1778 0.0
>3x_Contig1700
Length = 16332
Score = 1778 bits (893), Expect = 0.0
Identities = 931/944 (98%), Gaps = 4/944 (0%)
Strand = Plus / Plus
Query: 1 tagcgcgtggtcgawaggagtgaagaaaaaaaaaaaaactatcaagcgtcacgtggtaca 60
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 539 tagcgcgtggtcgaaaggagtgaagaaaaaaaaaaaaactatcaagcgtcacgtggtaca 598
Query: 61 gtggaaaatctcggagagcagtgtcgcagcgcgtatgtattccgtatccggtctgatccg 120
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 599 gtggaaaatt--ggagagcagtgtcgcagcgcgtatgtattccgtatccggtctgatccg 656
Query: 121 aggtatgccactagtggcgtgtctgggtgttcgggtgcattcggaataattggagtaatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 657 aggtatgccactagtggcgtgtctgggtgttcgggtgcattcggaataattggagtaatt 716
Query: 181 ggaggaacatagcccttttctttttcttttctggatgccggttcagggattactttcggt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 717 ggaggaacatagcccttttctttttcttttctggatgccggttcagggattactttcggt 776
Query: 241 tcctaaatcgcttgtctacatattcgcatctctacaaattagtactatattatggacagg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 777 tcctaaatcgcttgtctacatattcgcatctctacaaattagtactatattatggacagg 836
Query: 301 gtaataacactgtwagtkggagaycgatgctctacctgatttgagtgcaagtatacagcg 360
||||||||||||| ||| ||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 837 gtaataacactgttagttggagatcgatgctctacctgatttgagtgcaagtatacagcg 896
Query: 361 agagtccgtcacgtgacgcatggcctttagtagtggcaataggtgtagtagttccgagtc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 897 agagtccgtcacgtgacgcatggcctttagtagtggcaataggtgtagtagttccgagtc 956
Query: 421 gcttggatcgttgatccaaccatgtacttgtattgcattgtccagatgcattgcgta-ct 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 957 gcttggatcgttgatccaaccatgtacttgtattgcattgtccagatgcattgcgtagct 1016
Query: 480 gataggactgtyatcaatgataatcatttgagagaggtcacgtgacgtttcgatttgggt 539
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1017 gataggactgttatcaatgataatcatttgagagaggtcacgtgacgtttcgatttgggt 1076
Query: 540 tgccacggtaccgatgtccttcacgtaaccgacgccaggccgaagtgtgcaatcttctct 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1077 tgccacggtaccgatgtccttcacgtaaccgacgccaggccgaagtgtgcaatcttctct 1136
Query: 600 ataccatctgtagtgaaactgtaccgaacacgtctgttgtagccagtcgattactgggtc 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1137 ataccatctgtagtgaaactgtaccgaacacgtctgttgtagccagtcgattactgggtc 1196
Query: 660 tgcatactctttcatggatgctgtgaagatggcaatgtcgtaccattggctcgtctgttg 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1197 tgcatactctttcatggatgctgtgaagatggcaatgtcgtaccattggctcgtctgttg 1256
Query: 720 gagaaacatatcgcaatacggtctcttggcaacgttatataacgtggatatgtttgtctg 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1257 gagaaacatatcgcaatacggtctcttggcaacgttatataacgtggatatgtttgtctg 1316
Query: 780 cgggaatcgtacctctaccaggtgtatcattggtgtggtg-cactagggttcttgtctgt 838
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 1317 cgggaatcgtacctctaccaggtgtatcattggtgtggtgccactagggttcttgtctgt 1376
Query: 839 tgggttccctaacgatctactgttactcatggaatggatcaacgtttcatcgagatcgag 898
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1377 tgggttccctaacgatctactgttactcatggaatggatcaacgtttcatcgagatcgag 1436
Query: 899 ttctaaaagctttcgactggtagatagtagcattkattggggta 942
| |||||||||||||||||||||| ||||||||| |||||||||
Sbjct: 1437 tactaaaagctttcgactggtagaaagtagcattgattggggta 1480
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 12,245
Number of Sequences: 1807
Number of extensions: 12245
Number of successful extensions: 169
Number of sequences better than 1.0e-20: 1
length of query: 943
length of database: 10,358,551
effective HSP length: 16
effective length of query: 927
effective length of database: 10,329,639
effective search space: 9575575353
effective search space used: 9575575353
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.0 bits)